| Supplementary table 2. Top
259 genes that distinguish DFSP from the other soft tissue tumors as
identified by SAM |
|
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|
|
|
|
|
|
| Input
Parameters |
|
|
|
|
| Imputation Engine |
10-Nearest Neighbor Imputer |
|
| Data Type |
Two Class, unpaired data |
|
| Data in log scale? |
TRUE |
|
| Number of
Permutations |
1000 |
|
| Blocked
Permutation? |
FALSE |
|
| RNG Seed |
1234567 |
|
| (Delta, Fold
Change) |
(2,46002, ) |
|
| (Upper Cutoff,
Lower Cutoff) |
(4,02194, -6,08331) |
|
| Computed
Quantities |
|
|
|
|
| Computed
Exchangeability Factor S0 |
236.1422386 |
|
| S0 percentile |
0 |
|
| False Significant
Number (Median, 90 percentile) |
(0,57990, 0,57990) |
|
| False Discovery
Rate (Median, 90 percentile) |
(0,19928, 0,19928) |
|
| Pi0Hat |
0.5799 |
|
|
|
| chromosome |
location on the chromosome |
gene ID (with hyperlink to
http://genome-www5.stanford.edu/cgi-bin/SMD/source/) |
|
|
http://genome.ucsc.edu/;Oct
7, 2000 Freeze |
|
|
|
|
|
| 1 |
5343073 |
120799
MOT8 hypothetical protein MOT8 Hs.25924 H10068 |
|
| 1 |
5477975 |
114233 Homo sapiens clone 23927 mRNA sequence
Hs.12473 H06156 |
|
| 1 |
34619240 |
100990
COL16A1 collagen, type XVI, alpha 1 Hs.26208 R54778 |
|
| 1 |
44346595 |
108244
HEYL hairy/enhancer-of-split related with YRPW motif-like Hs.23823 R25238 |
|
| 1 |
71023954 |
313886
FLJ10884 hypothetical protein FLJ10884 Hs.150890 AI341793 |
|
| 1 |
102783923 |
220131
TGFBR3 transforming growth factor, beta receptor III (betaglycan, 300kD)
Hs.342874 N26658 |
|
| 1 |
129390385 |
110916
IGSF3 immunoglobulin superfamily, member 3 Hs.81234 AA425437 |
|
| 1 |
129765206 |
111092
PTGFRN prostaglandin F2 receptor negative regulator Hs.300591 T83630 |
|
| 1 |
131914161 |
99539 ESTs Hs.164680 AA463229 |
|
| 1 |
164077759 |
108043 ESTs Hs.108264 AA401244 |
|
| 1 |
177693047 |
113037 **ESTs, Highly similar to transcriptional
acitvator [Homo sapiens] [H.sapiens] Hs.356653 H05654 |
|
| 1 |
212856233 |
120717
C1orf17 chromosome 1 open reading frame 17 Hs.106794 H08862 |
|
| 1 |
226095111 |
307158
HFL1 H factor (complement)-like 1 Hs.278568 AA953249 |
|
| 1 |
234168692 |
107193
PEPP3 **phosphoinositol 3-phosphate-binding protein-3 Hs.241161 R54589 |
|
| 1 |
234750555 |
102119
CNTN2 contactin 2 (axonal) Hs.2998 R14151 |
|
| 1 |
239886041 |
102058
CD34 CD34 antigen Hs.374990 AA434387 |
|
| 1 |
243474316 |
109952
FLJ10724 melanoma antigen recognized by T cells 2 Hs.58650 AA010728 |
|
| 1 |
265958310 |
103146
FLJ14525 hypothetical protein FLJ14525 Hs.26812 N59373 |
|
| 1 |
#N/A |
221277 Homo sapiens, clone MGC:25060
IMAGE:4480427, mRNA, complete cds Hs.22586 AA776087 |
|
| 1 |
#N/A |
111682 Homo sapiens cDNA FLJ32096 fis, clone
OCBBF2001075 Hs.101077 R47938 |
|
| 2 |
46091200 |
106353
KIAA0436 putative L-type neutral amino acid transporter Hs.110 AA902897 |
|
| 2 |
72014246 |
309960
KIAA0053 KIAA0053 gene product Hs.1528 AI264291 |
|
| 2 |
103338173 |
120709 Homo sapiens cDNA FLJ30555 fis, clone
BRAWH2003818 Hs.125019 H17143 |
|
| 2 |
104255404 |
105455 Homo sapiens mRNA; cDNA DKFZp586P1124
(from clone DKFZp586P1124) Hs.21380 R41972 |
|
| 2 |
153424918 |
113011
ACVR2 activin A receptor, type II Hs.26014 AA682819 |
|
| 2 |
166320792 |
108970
PLA2R1 phospholipase A2 receptor 1, 180kD Hs.171945 W04525 |
|
| 2 |
166321764 |
98438 ESTs Hs.32345 AI668612 |
|
| 2 |
166467846 |
106759 R91516 |
|
| 2 |
182339972 |
109926
CHN1 chimerin (chimaerin) 1 Hs.22660 AA598668 |
|
| 2 |
183922655 |
114638
HOXD4 homeo box D4 Hs.278255 AA447692 |
|
| 2 |
191259019 |
115963
FRZB frizzled-related protein Hs.153684 H87275 |
|
| 2 |
199634727 |
114887
MYO1B myosin IB Hs.121576 N95358 |
|
| 2 |
206312891 |
319005
FLJ30574 hypothetical protein FLJ30574 Hs.350388 AI206317 |
|
| 2 |
211461527 |
106072
FZD7 frizzled homolog 7 (Drosophila) Hs.173859 N69049 |
|
| 2 |
212259473 |
225062
LOC130026 hypothetical protein BC000993 Hs.334319 AA774047 |
|
| 2 |
212873862 |
118861 Homo sapiens, clone IMAGE:5275933, mRNA
Hs.285728 AA045340 |
|
| 2 |
226422206 |
100206 Homo sapiens, clone IMAGE:4183312, mRNA,
partial cds Hs.180324 T52829 |
|
| 2 |
252270534 |
113289
DKFZP586B2420 DKFZP586B2420 protein Hs.7949 W58343 |
|
| 2 |
#N/A |
307742
FZD7 frizzled homolog 7 (Drosophila) Hs.173859 H71474 |
|
| 2 |
#N/A |
116142
CHN1 chimerin (chimaerin) 1 Hs.22660 AA902624 |
|
| 3 |
32952797 |
315088
RARB retinoic acid receptor, beta Hs.171495 H69474 |
|
| 3 |
52791869 |
98981 ESTs, Moderately similar to ALU8_HUMAN Alu
subfamily SX sequence contamination warning entry [H.sapiens] Hs.356718
T67066 |
|
| 3 |
75186605 |
119130 Homo sapiens cDNA FLJ13296 fis, clone
OVARC1001261 Hs.21610 R67543 |
|
| 3 |
86818833 |
115748
CNTN3 contactin 3 (plasmacytoma associated) Hs.35089 N50845 |
|
| 3 |
135969325 |
221066 ESTs Hs.42419 N22766 |
|
| 3 |
172633557 |
100008 ESTs, Weakly similar to T08678
hypothetical protein DKFZp564I1922.1 - human (fragment) [H.sapiens] Hs.88162
H89282 |
|
| 3 |
191624988 |
113637
SERPINI1 serine (or cysteine) proteinase inhibitor, clade I (neuroserpin),
member 1 Hs.78589 AA115876 |
|
| 3 |
222947363 |
102660
APOD apolipoprotein D Hs.75736 H15842 |
|
| 3 |
#N/A |
319564 EST Hs.134897 AI092576 |
|
| 4 |
16329409 |
100943
C1QTNF7 C1q and tumor necrosis factor related protein 7 Hs.153714 N75552 |
|
| 4 |
21868239 |
118597 ESTs, Highly similar to T42626 secreted
leucine-rich repeat-containing protein SLIT2 - mouse (fragment) [M.musculus]
Hs.110373 AA489463 |
|
| 4 |
42166224 |
315624 ESTs Hs.263351 AI224841 |
|
| 4 |
60016365 |
117136
KIAA1211 KIAA1211 protein Hs.205293 N35889 |
|
| 4 |
103696478 |
120432
TSPAN-5 tetraspan 5 Hs.8037 W72167 |
|
| 4 |
105641671 |
102583
LOC115265 similar to Smhs1 protein Hs.107515 H15301 |
|
| 4 |
109046996 |
112945
LOC56898 oxidoreductase UCPA Hs.124696 R97516 |
|
| 4 |
117837730 |
118473
ENPEP glutamyl aminopeptidase (aminopeptidase A) Hs.291 AA099910 |
|
| 4 |
131117207 |
226260 ESTs, Weakly similar to extensin-like
protein [Arabidopsis thaliana] [A.thaliana] Hs.189114 AA890146 |
|
| 4 |
148488373 |
115463
SERPINE2 serine (or cysteine) proteinase inhibitor, clade E (nexin,
plasminogen activator inhibitor type 1), member 2 Hs.21858 N57754 |
|
| 4 |
156778768 |
111691
EDNRA endothelin receptor type A Hs.76252 AA450009 |
|
| 4 |
179134710 |
98721 ESTs, Moderately similar to AF097994_1
L-kynurenine/alpha-aminoadipate aminotransferase [Homo sapiens] [H.sapiens]
Hs.269084 N54512 |
|
| 4 |
#N/A |
119371
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) Hs.88044
AA055439 |
|
| 5 |
7133642 |
102582 Homo sapiens cDNA FLJ12815 fis, clone
NT2RP2002546 Hs.49476 AA284237 |
|
| 5 |
18503286 |
312706 ESTs Hs.116192 AI339471 |
|
| 5 |
18504482 |
100828
ANKH **ankylosis, progressive homolog (mouse) Hs.168640 H10416 |
|
| 5 |
84441328 |
110269 ESTs Hs.42502 AA041482 |
|
| 5 |
84564652 |
108485
F2R coagulation factor II (thrombin) receptor Hs.128087 AA455910 |
|
| 5 |
84583184 |
222380 ESTs, Weakly similar to hypothetical
protein FLJ20489 [Homo sapiens] [H.sapiens] Hs.355574 N20406 |
|
| 5 |
141743293 |
109176
FBN2 fibrillin 2 (congenital contractural arachnodactyly) Hs.79432 T98151 |
|
| 5 |
159120616 |
107012
ARAP3 ARF-GAP, RHO-GAP, ankyrin repeat and plekstrin homology
domains-containing protein 3 Hs.25277 AA458491 |
|
| 5 |
169811251 |
310422
ZNF300 kruppel-like zinc finger protein Hs.288928 AA994690 |
|
| 5 |
175405407 |
99317
C5orf4 chromosome 5 open reading frame 4 Hs.10235 AA406261 |
|
| 5 |
189215031 |
108994
SLIT3 slit homolog 3 (Drosophila) Hs.57929 H41160 |
|
| 5 |
189695089 |
117849 ESTs, Highly similar to slit homolog 3
(Drosophila); slit (Drosophila) homolog 3; slit (Drosophila) homolog 2; slit2
[Homo sapiens] [H.sapiens] Hs.129229 AA991373 |
|
| 5 |
#N/A |
102351
PDGFRB platelet-derived growth factor receptor, beta polypeptide Hs.76144
AI002365 |
|
| 6 |
17297288 |
99347
MIR myosin regulatory light chain interacting protein Hs.20072 AA486836 |
|
| 6 |
22970035 |
225012 Homo sapiens mRNA full length insert cDNA
clone EUROIMAGE 1977059 Hs.351928 N23605 |
|
| 6 |
22970035 |
107550
SOX4 SRY (sex determining region Y)-box 4 Hs.83484 AA453420 |
|
| 6 |
23042290 |
104911 ESTs Hs.323780 N22836 |
|
| 6 |
23529116 |
102100 N90913 |
|
| 6 |
41679579 |
106863
MSI2 musashi homolog 2 (Drosophila) Hs.173179 AA235112 |
|
| 6 |
47789353 |
315947
TReP-132 transcriptional regulating protein 132 Hs.50102 AI299636 |
|
| 6 |
58636004 |
116883 Homo sapiens, clone IMAGE:3450973, mRNA
Hs.7921 AA620437 |
|
| 6 |
71460236 |
118055 EST Hs.112862 AA620423 |
|
| 6 |
156918220 |
120174 ESTs Hs.110406 AA039712 |
|
| 6 |
161692046 |
101310
AKAP12 A kinase (PRKA) anchor protein (gravin) 12 Hs.788 AA478542 |
|
| 6 |
173331720 |
102475
PLG plasminogen Hs.75576 T73090 |
|
| 6 |
177715657 |
222887 ESTs Hs.348762 AA700772 |
|
| 6 |
#N/A |
225230
KIF13A kinesin family member 13A Hs.146286 R39197 |
|
| 6 |
#N/A |
100677 AI049860 |
|
| 7 |
2261517 |
99361
LFNG lunatic fringe homolog (Drosophila) Hs.159142 R56561 |
|
| 7 |
4813019 |
103310 Homo sapiens mRNA for FLJ00148 protein
Hs.21192 R60712 |
|
| 7 |
7419260 |
311489 ESTs Hs.150665 AA947456 |
|
| 7 |
30859723 |
220745 Homo sapiens cDNA FLJ30904 fis, clone
FEBRA2005824 Hs.7913 N29882 |
|
| 7 |
31123702 |
224172
CARD4 caspase recruitment domain family, member 4 Hs.19405 AA699441 |
|
| 7 |
31859827 |
113563
ADCYAP1R1 adenylate cyclase activating polypeptide 1 (pituitary) receptor
type I Hs.4748 H09078 |
|
| 7 |
81173862 |
120135
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting
activity polypeptide 1 Hs.203862 AA406364 |
|
| 7 |
101422552 |
105797
G10 maternal G10 transcript Hs.330310 AA406040 |
|
| 7 |
137390884 |
225922 Homo sapiens mRNA; cDNA DKFZp566P013 (from
clone DKFZp566P013) Hs.172778 R56613 |
|
| 8 |
9929447 |
115275 ESTs, Weakly similar to hypothetical
protein FLJ21140 [Homo sapiens] [H.sapiens] Hs.29068 R70140 |
|
| 8 |
19667532 |
112156 Homo sapiens mRNA; cDNA DKFZp667D095 (from
clone DKFZp667D095) Hs.93961 AA417651 |
|
| 8 |
22577318 |
120819
LZTS1 leucine zipper, putative tumor suppressor 1 Hs.93605 H09757 |
|
| 8 |
44587337 |
120815
C8orf4 chromosome 8 open reading frame 4 Hs.283683 H16793 |
|
| 8 |
88708832 |
99965 Homo sapiens, clone IMAGE:3618365, mRNA
Hs.141693 H19013 |
|
| 8 |
100060417 |
223663 ESTs, Highly similar to B57784 MTG8
protein splice form a - human [H.sapiens] Hs.221450 AA704718 |
|
| 8 |
#N/A |
116123
CBFA2T1 core-binding factor, runt domain, alpha subunit 2; translocated to,
1; cyclin D-related Hs.31551 R91568 |
|
| 8 |
#N/A |
116262
EPHX2 epoxide hydrolase 2, cytoplasmic Hs.113 R73524 |
|
| 9 |
29204741 |
105256 ESTs Hs.293849 N72128 |
|
| 9 |
41545934 |
104737
P23 **unactive progesterone receptor, 23 kD Hs.278270 N45556 |
|
| 9 |
68108024 |
114871 ESTs Hs.351108 AA598500 |
|
| 9 |
94111288 |
120409
UACA **uveal autoantigen with coiled-coil domains and ankyrin repeats
Hs.49753 N26011 |
|
| 9 |
94236793 |
98915
OGN osteoglycin (osteoinductive factor, mimecan) Hs.109439 AA045327 |
|
| 9 |
94267188 |
114768
OMD osteomodulin Hs.94070 N32201 |
|
| 9 |
94348181 |
100732
ECM2 extracellular matrix protein 2, female organ and adipocyte specific
Hs.35094 N79778 |
|
| 9 |
113325932 |
111660 Homo sapiens mRNA full length insert cDNA
clone EUROIMAGE 248114 Hs.8963 AA424560 |
|
| 9 |
114943505 |
120323 **Homo sapiens cDNA FLJ31796 fis, clone
NT2RI2008841 Hs.153799 H87175 |
|
| 9 |
127713333 |
114384 Homo sapiens, clone IMAGE:3140802, mRNA
Hs.94795 T70352 |
|
| 9 |
129144415 |
103509
GOLGA2 **golgi autoantigen, golgin subfamily a, 2 Hs.24049 AA424786 |
|
| 9 |
134636414 |
222627
LAMC3 laminin, gamma 3 Hs.69954 R17731 |
|
| 9 |
134718837 |
309893
FLJ00024 hypothetical protein FLJ00024 Hs.143878 AA961074 |
|
| 9 |
#N/A |
98912
IL11RA interleukin 11 receptor, alpha Hs.64310 AI822086 |
|
| 9 |
#N/A |
224116 ESTs, Weakly similar to A46661 leukotriene
B4 omega-hydroxylase (EC 1.14.15.-) cytochrome P450 - human [H.sapiens]
Hs.355694 AA778653 |
|
| 9 |
#N/A |
110026
DKFZp761J1523 hypothetical protein DKFZp761J1523 Hs.257391 AA233552 |
|
| 9 |
#N/A |
108392
ROR2 receptor tyrosine kinase-like orphan receptor 2 Hs.155585 N94921 |
|
| 9 |
#N/A |
118161
PRX2 paired related homeobox protein Hs.86172 AA548667 |
|
| 9 |
#N/A |
224528 EST, Weakly similar to B45082 neurotrophic
receptor ror2 precursor - human [H.sapiens] Hs.231139 AA701961 |
|
| 10 |
21437184 |
102206 ESTs Hs.99472 R16259 |
|
| 10 |
25872520 |
311009
DKFZP761L0424 hypothetical protein DKFZp761L0424 Hs.149377 AA927734 |
|
| 10 |
31961930 |
111520
KIAA1462 KIAA1462 protein Hs.46901 AA412199 |
|
| 10 |
33741171 |
103963 ESTs Hs.104372 R22034 |
|
| 10 |
41228467 |
225798
PCDH18 protocadherin 18 Hs.97266 AA704401 |
|
| 10 |
51346855 |
102756 ESTs Hs.94309 AI822111 |
|
| 10 |
62565884 |
107216 Homo sapiens mRNA; cDNA DKFZp564B222 (from
clone DKFZp564B222) Hs.100261 AA447503 |
|
| 10 |
66983192 |
113071
EGR2 early growth response 2 (Krox-20 homolog, Drosophila) Hs.1395 AA446027 |
|
| 10 |
104360829 |
106182 ESTs, Highly similar to T08708
hypothetical protein DKFZp564D116.1 - human (fragment) [H.sapiens] Hs.246316
AI820826 |
|
| 10 |
113102876 |
221124 Homo sapiens cDNA: FLJ22130 fis, clone
HEP19632 Hs.146233 AA778276 |
|
| 10 |
123805834 |
119511
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) Hs.348412
AA029451 |
|
| 10 |
130839943 |
114183
LOC151568 hypothetical protein BC009491 Hs.343567 AA608555 |
|
| 10 |
138649934 |
105595 **Homo sapiens cDNA FLJ31066 fis, clone
HSYRA2001153 Hs.352537 AA009647 |
|
| 10 |
#N/A |
101008 ESTs, Weakly similar to hypothetical
protein FLJ20837 [Homo sapiens] [H.sapiens] Hs.369669 AA630096 |
|
| 10 |
#N/A |
110346 Homo sapiens cDNA FLJ12007 fis, clone
HEMBB1001588 Hs.129086 AA987224 |
|
| 11 |
14891471 |
115949
SPON1 spondin 1, (f-spondin) extracellular matrix protein Hs.5378 H09099 |
|
| 11 |
34151010 |
115168 ESTs, Weakly similar to putative
phosphatidylinositol-glycan synthase [Arabidopsis thaliana] [A.thaliana]
Hs.47974 N55492 |
|
| 11 |
35801916 |
108495 Homo sapiens, similar to hypothetical
protein (H. sapiens), clone MGC:34830 IMAGE:5200904, mRNA, complete cds
Hs.22270 R17633 |
|
| 11 |
50259807 |
106288
NR1H3 nuclear receptor subfamily 1, group H, member 3 Hs.347353 H61726 |
|
| 11 |
61214177 |
101175
KIAA0937 KIAA0937 protein Hs.62264 AA487527 |
|
| 11 |
64273865 |
103164
RAB3IL1 RAB3A interacting protein (rabin3)-like 1 Hs.13759 T70580 |
|
| 11 |
69972702 |
221953
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting
activity polypeptide 1 Hs.203862 W46769 |
|
| 11 |
94846219 |
112835 EST Hs.49609 N69100 |
|
| 11 |
111191242 |
99984 Homo sapiens cDNA FLJ13604 fis, clone
PLACE1010401 Hs.23193 R21422 |
|
| 11 |
111195257 |
317006
AD031 AD031 protein Hs.44004 AI352084 |
|
| 11 |
131232124 |
107266
KIAA0638 KIAA0638 protein Hs.77864 AA405486 |
|
| 11 |
133307586 |
224408
CHN1 chimerin (chimaerin) 1 Hs.22660 AA888225 |
|
| 11 |
133307586 |
223790 R99080 |
|
| 11 |
133314340 |
319644 R07168 |
|
| 11 |
143663906 |
103839
TEM8 tumor endothelial marker 8 Hs.8966 H58644 |
|
| 11 |
#N/A |
308936
SCDGF-B spinal cord-derived growth factor-B Hs.112885 AA904948 |
|
| 11 |
#N/A |
114989
TEM8 tumor endothelial marker 8 Hs.8966 N20989 |
|
| 11 |
#N/A |
106337 ESTs Hs.146276 AI261536 |
|
| 11 |
#N/A |
224268
G2 G2 protein Hs.30660 R38090 |
|
| 11 |
#N/A |
108008 ESTs, Moderately similar to ALU8_HUMAN Alu
subfamily SX sequence contamination warning entry [H.sapiens] Hs.356718
W78840 |
|
| 11 |
#N/A |
103632 ESTs Hs.133863 R14773 |
|
| 12 |
7125896 |
225449 Homo sapiens cDNA FLJ31733 fis, clone
NT2RI2006943 Hs.44067 N32102 |
|
| 12 |
32309586 |
118336 Homo sapiens cDNA FLJ14337 fis, clone
PLACE4000494 Hs.180187 AA128017 |
|
| 12 |
52679293 |
106957
LFG lifeguard Hs.182859 R26621 |
|
| 12 |
54866907 |
101574
OR7E47P olfactory receptor, family 7, subfamily E, member 47 pseudogene
Hs.355314 AA620759 |
|
| 12 |
69929375 |
225591 ESTs, Moderately similar to ZN91_HUMAN
Zinc finger protein 91 (Zinc finger protein HTF10) (HPF7) [H.sapiens]
Hs.339024 AA663730 |
|
| 12 |
97072894 |
104712 ESTs Hs.63176 AA055348 |
|
| 12 |
#N/A |
99264
ACVRL1 activin A receptor type II-like 1 Hs.172670 H42572 |
|
| 12 |
#N/A |
116169
AVPR1A arginine vasopressin receptor 1A Hs.2131 AA448190 |
|
| 13 |
29921275 |
222279 Homo sapiens, clone IMAGE:4825471, mRNA
Hs.13205 N24070 |
|
| 13 |
34107647 |
226711
NBEA neurobeachin Hs.3821 AA775279 |
|
| 13 |
34590289 |
112697 Homo sapiens clone 24628 mRNA sequence
Hs.129997 AA885845 |
|
| 13 |
83275076 |
101968
SPRY2 sprouty homolog 2 (Drosophila) Hs.18676 AA453759 |
|
| 13 |
#N/A |
245567
KLF5 Kruppel-like factor 5 (intestinal) Hs.84728 R27011 |
|
| 14 |
37934508 |
113114 Homo sapiens cDNA FLJ30803 fis, clone
FEBRA2001245, weakly similar to NAG14 Hs.31522 H82848 |
|
| 14 |
55937930 |
112123
LOC51339 heptacellular carcinoma novel gene-3 protein Hs.48950 AA487274 |
|
| 14 |
60902355 |
117814
ARHJ ras homolog gene family, member J Hs.243010 AA010753 |
|
| 14 |
67461488 |
110272
KIAA1130 KIAA1130 protein Hs.21035 H18956 |
|
| 14 |
69983847 |
99359 Homo sapiens, clone IMAGE:5286091, mRNA,
partial cds Hs.375008 AA417567 |
|
| 14 |
79087676 |
114906
NRXN3 neurexin 3 Hs.247837 AA450335 |
|
| 14 |
91734062 |
226876
FBLN5 fibulin 5 Hs.11494 H17615 |
|
| 14 |
101510924 |
120841 ESTs Hs.26346 R44918 |
|
| 15 |
23508679 |
100163
CHRFAM7A CHRNA7 (cholinergic receptor, nicotinic, alpha polypeptide 7, exons
5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion
Hs.353211 W93369 |
| 15 |
33652110 |
102406 ESTs Hs.50162 N67355 |
|
| 15 |
54677164 |
105870
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 Hs.95197 AA447978 |
|
| 15 |
58022882 |
104996 ESTs Hs.56254 W58165 |
|
| 15 |
68086906 |
107874 ESTs, Weakly similar to hypothetical
protein FLJ20489 [Homo sapiens] [H.sapiens] Hs.98312 AA418895 |
|
| 15 |
78318949 |
114842 ESTs Hs.161757 T67520 |
|
| 15 |
91561096 |
226855
LOC56963 hypothetical protein from EUROIMAGE 363668 Hs.271277 AA634385 |
|
| 16 |
76374194 |
100977
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) Hs.75929 AA136983 |
|
| 16 |
76412077 |
319668 ESTs Hs.56071 AI040305 |
|
| 16 |
83261024 |
109540
WWP2 Nedd-4-like ubiquitin-protein ligase Hs.333382 H68403 |
|
| 16 |
93584201 |
118886
MAF v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian) Hs.30250
AA043501 |
|
| 17 |
36929756 |
220265
VTS58635 ras-like protein VTS58635 Hs.24986 H52727 |
|
| 17 |
40846456 |
224573
TEM7 tumor endothelial marker 7 precursor Hs.125036 AA678084 |
|
| 17 |
46275454 |
114309
MEOX1 mesenchyme homeo box 1 Hs.438 AA426311 |
|
| 17 |
55218434 |
109549
SPAG9 sperm associated antigen 9 Hs.129872 AA399253 |
|
| 17 |
62375317 |
119312 ESTs Hs.40639 N26608 |
|
| 17 |
62459841 |
311281 ESTs, Weakly similar to T08931
hypothetical protein T15N24.100 - Arabidopsis thaliana [A.thaliana] Hs.156395
AI339225 |
|
| 17 |
62632196 |
117507
MSI2 musashi homolog 2 (Drosophila) Hs.173179 N45139 |
|
| 17 |
63719362 |
308002
POPX1 partner of PIX 1 Hs.166351 W40125 |
|
| 17 |
64389427 |
108542 ESTs, Highly similar to T50835
hypothetical protein [imported] - human [H.sapiens] Hs.88845 AA046023 |
|
| 17 |
65115444 |
222413
LOC51136 PTD016 protein Hs.30154 N51514 |
|
| 17 |
66438203 |
307520
TBX2 T-box 2 Hs.168357 AA927923 |
|
| 17 |
68057287 |
315099 ESTs, Weakly similar to ALU1_HUMAN Alu
subfamily J sequence contamination warning entry [H.sapiens] Hs.55780
AI203113 |
|
| 17 |
72118231 |
106729
PRKCA protein kinase C, alpha Hs.169449 AA029890 |
|
| 17 |
73805025 |
111111 ESTs Hs.268874 R98003 |
|
| 17 |
74243322 |
101293
ABCA9 ATP-binding cassette, sub-family A (ABC1), member 9 Hs.301496 AI822061 |
|
| 17 |
74286183 |
103577
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6 Hs.15780 AA099357 |
|
| 17 |
78871861 |
105491
CEP4 Cdc42 effector protein 4; binder of Rho GTPases 4 Hs.3903 AA449061 |
|
| 17 |
80349103 |
113723
TTYH2 tweety homolog 2 (Drosophila) Hs.27935 AA434395 |
|
| 17 |
80850831 |
313299
FDXR ferredoxin reductase Hs.69745 AI671604 |
|
| 17 |
82319242 |
105851 ESTs, Weakly similar to putative protein
[Arabidopsis thaliana] [A.thaliana] Hs.374817 AA452113 |
|
| 17 |
86546682 |
110582
FLJ20753 hypothetical protein FLJ20753 Hs.301363 AA431750 |
|
| 17 |
89406603 |
114952
RAB40B RAB40B, member RAS oncogene family Hs.302498 T60070 |
|
| 17 |
#N/A |
307146
AXIN2 axin 2 (conductin, axil) Hs.127337 AA976642 |
|
| 17 |
#N/A |
120766
GRB2 growth factor receptor-bound protein 2 Hs.285814 AA425382 |
|
| 17 |
#N/A |
99971 ESTs Hs.192262 AI192496 |
|
| 17 |
#N/A |
100201
RAB40B RAB40B, member RAS oncogene family Hs.302498 AI668570 |
|
| 18 |
49895568 |
110846 Homo sapiens cDNA FLJ30016 fis, clone
3NB692000429 Hs.14931 N55259 |
|
| 18 |
58436398 |
310651 Homo sapiens cDNA FLJ11918 fis, clone
HEMBB1000272 Hs.289068 AA953301 |
|
| 18 |
77814619 |
110377 ESTs Hs.7065 H05818 |
|
| 18 |
86112725 |
116542
CTDP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A)
phosphatase, subunit 1 Hs.4076 W40287 |
|
| 19 |
22649686 |
222273
CRLF1 cytokine receptor-like factor 1 Hs.114948 AA706010 |
|
| 19 |
36551968 |
120229
KIAA1474 KIAA1474 protein Hs.278436 N70608 |
|
| 19 |
61300274 |
223240
PLEKHA4 pleckstrin homology domain-containing, family A (phosphoinositide
binding specific) member 4 Hs.9469 AA521373 |
|
| 19 |
74697125 |
104437
ZF5128 zinc finger protein Hs.296365 N74284 |
|
| 20 |
5644614 |
119206 Homo sapiens mRNA; cDNA DKFZp434I0623
(from clone DKFZp434I0623) Hs.123609 AA451822 |
|
| 20 |
33155479 |
118288
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2
Hs.153934 AA496845 |
|
| 20 |
37941922 |
226968
KIAA1755 KIAA1755 protein Hs.114085 AA701983 |
|
| 20 |
53429322 |
116284
SHOX2 short stature homeobox 2 Hs.55967 AA425419 |
|
| 20 |
54571284 |
100071 ESTs Hs.32135 N78909 |
|
| 20 |
58614638 |
104674
BMP7 bone morphogenetic protein 7 (osteogenic protein 1) Hs.170195 W73473 |
|
| 20 |
66011169 |
116928
EEF1A1 **eukaryotic translation elongation factor 1 alpha 1 Hs.181165 N93790 |
|
| 20 |
66011169 |
307452
ZNF340 zinc finger protein 340 Hs.254837 AA917868 |
|
| 21 |
40949318 |
225144 ESTs, Moderately similar to CN9A_HUMAN
High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [H.sapiens]
Hs.371219 AA670280 |
|
| 21 |
#N/A |
111283 AA995573 |
|
| 22 |
16642155 |
117520
PNUTL1 peanut-like 1 (Drosophila) Hs.3847 N92319 |
|
| 22 |
16894328 |
98450
ARVCF armadillo repeat gene deletes in velocardiofacial syndrome Hs.171900
H17198 |
|
| 22 |
17075328 |
106130 ESTs Hs.98570 AA443624 |
|
| 22 |
20874065 |
108835 ESTs, Weakly similar to I38022
hypothetical protein - human [H.sapiens] Hs.28439 H87363 |
|
| 22 |
21223467 |
101133
BK65A6.2 Sushi domain (SCR repeat) containing Hs.131819 AI015693 |
|
| 22 |
32697017 |
317973
RBM9 RNA binding motif protein 9 Hs.5011 AI242494 |
|
| 22 |
36147957 |
121498
PDGFB platelet-derived growth factor beta polypeptide (simian sarcoma viral
(v-sis) oncogene homolog) Hs.1976 W72000 |
|
| 22 |
#N/A |
102164 ESTs, Weakly similar to ALU1_HUMAN Alu
subfamily J sequence contamination warning entry [H.sapiens] Hs.369903
AI003064 |
|
| 23 |
12182795 |
103727
GPM6B glycoprotein M6B Hs.5422 N59368 |
|
| 23 |
43667007 |
98806 Homo sapiens cDNA: FLJ21909 fis, clone
HEP03834 Hs.18612 W90727 |
|
| 23 |
50703355 |
108033
KLF8 Kruppel-like factor 8 Hs.320861 H22820 |
|
| 23 |
72563740 |
117871
ITM2A integral membrane protein 2A Hs.17109 AA775257 |
|
| 23 |
97346442 |
106800
SYTL4 synaptotagmin-like 4 (granuphilin-a) Hs.247525 AA451888 |
|
| 23 |
110582334 |
119853
CAPN6 calpain 6 Hs.169172 AA457238 |
|
| 23 |
119896413 |
225683
SEP2 septin 6 Hs.90998 AA868745 |
|
| 23 |
160789738 |
110950 Homo sapiens cDNA FLJ30869 fis, clone
FEBRA2004224 Hs.349611 AA424937 |
|
| X |
#N/A |
102382
AMOT angiomotin Hs.9271 AA490582 |
|
| #N/A |
#N/A |
119666 ESTs Hs.247150 AA459734 |
|
| #N/A |
#N/A |
112147 Homo sapiens cDNA FLJ30065 fis, clone
ADRGL2000328 Hs.141120 AI820817 |
|
| #N/A |
#N/A |
119852
CTSE cathepsin E Hs.1355 H94487 |
|
| #N/A |
#N/A |
115180 Homo sapiens mRNA; cDNA DKFZp434O1311
(from clone DKFZp434O1311) Hs.30483 W93481 |
|
|
|
|
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