Supplemental Figure 10. The proliferation clusters and their expression during the cell cycle (Figure 4) with all gene names. A. Cell cycle regulation of the breast tumor proliferation cluster. The expression patterns of the 112 clones in the breast tumor "proliferation cluster" (Perou et al., 2000), were examined in the cell cycle dataset, along with their expression in breast tumors and cell lines as described in Figure 4. The clones are ordered by their peak expression during the cell cycle (as in Figure 3A) such that each row corresponds to a single clone. The order of the breast tumor samples based on hierarchical clustering using 1753 genes is as previously described (Perou et al., 2000). B. Cell cycle regulation of lymphoma proliferation cluster. As above, the genes (i.e. rows) are ordered by peak expression during the cell cycle. The order of the tumors, based on hierarchical clustering using a larger dataset, is as previously published (Alizadeh et al., 2000).