Supplemental material for O. Alter, P. O. Brown and D. Botstein, "Processing and Modeling Genome-Wide Expression Data Using Singular Value Decomposition," in Microarrays: Optical Technologies and Informatics, edited by M. L. Bittner, Y. Chen, A. N. Dorsel and E. R. Dougherty
(International Society for Optical Engineering, Bellingham, 2001), vol. 4266,
pp. 171–186.
- A PDF format file, readable by Adobe Acrobat Reader.
- SPIE_2001.pdf
- A PDF format file, readable by Adobe Acrobat Reader.
- SPIE_2001_Appendix.pdf
- Mathematica 3.0 code files, executable by Mathematica 3.0 and readable by the
freely available MathReader 3.0.
- PDF format files, readable by Adobe Acrobat Reader:
Tab-delimited text format files, readable by both Mathematica and Microsoft Excel.
Expression Datasets and Classification Lists of Cell Cycle-Regulated Genes
- Reproduced from P. T. Spellman, G. Sherlock, M. Q. Zhang, V. R. Iyer, K. Anders, M. B. Eisen, P. O. Brown, D. Botstein and B. Futcher, "Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization,"
Molecular Biology of the Cell 9 (12), pp. 3273–3297 (December 1998).
Gene Annotation Lists
- Reproduced from the Stanford
Saccharomyces cerevisiae Genome Database (SGD).
- Annotate_Cycle.txt
Singular Value Decomposition-Normalized and Sorted Expression Datasets