Supplemental Table 2. Correlation of gene expression domains in cultured fibroblasts with phenotypes in genetic diseases. For detailed descriptions of mutant alleles and clinical features, please see Online Mendelian Inheritance in Man and references therein.
Diseases
|
Gene/ Protein
|
Site of
Overexpression
|
Clinical features
|
|
Bethem
myopathy |
COL6A1 |
thigh,
abdomen, back |
Proximal
limb-girdle myopathy with joint contractures |
|
Conradi-Hunerman
syndrome |
emopamil
binding protein |
arm,
abdomen |
Whorled
ichthyosis, chondrodysplasia punctata, rhizomelic shortening of limbs |
|
Ehler-Danlos
I |
Collagen
type V COL1A1 |
fetal skin |
Hyperextensile skin. Loose
joints. Fragile skin, easy bruising and heals with “cigarette paper” scars.
COL5A1 is also mutated in EDS2 (milder phenotype); COL1A1 also mutated in
EDS7. |
|
Ehler-Danlos
V |
lysine
oxidase |
cutaneous |
Similar to type I but less
severe. X-linked. |
|
Ehler-Danlos
VI |
lysine
hydroxylase |
fetal skin |
Similar to type I plus
kyphoscoliosis or ocular complications such as retinal detachment or
keratoconus. |
|
Ehler-Danlos
X |
Fibronectin |
cutaneous |
Similar to type I plus defect in
collagen-induced platelet aggregation. |
|
hand-foot-genital
syndrome |
HOXA13 |
toe,
foreskin |
Hypoplastic
distal phalanges, thenar eminence. Hypospadias in males, bifid uterus in
females and anomalies in urogential system. |
|
Marfan's
syndrome |
Fibrillin |
cutaneous |
Striae distensae. Increased
height and limb length. Loose joints; mitral valve prolapse and risk of
thoracic aneurysm. |
|
osteogenesis
imperfecta |
COL1A1 |
fetal
skin |
Thin translucent skin, multiple
fractures, blue sclera, poor dentition and otosclerosis. |
|
pycnodysostosis |
cathepsin
K |
cutaneous
and gum |
Short stature, brachycephaly,
short fingers, osteosclerosis and open cranial sutures. |
|
striate
palmo-plantar keratoderma |
desmoplakin
I |
toe |
Thick hyperkeratotic linear
papules on palms and soles. |
|
ulnar-mammary
syndrome |
TBX3 |
foreskin,
gum |
defect in
apocrine differentiation. Hypogenitalism, dental abnormalities. Postaxial
limb defects |
|
X-linked
ichthyosis |
arylsulfatase
C |
cutaneous |
Diffuse
ichthyosis |