URL: http://genome-www.stanford.edu/mammal/#orfs
DATA: id_70.dat
REFERENCE:
Botstein, D., Chervitz, S.A., and Cherry, J.M., (1997), "Yeast as a Model Organism", Science 277: 1259.
CONTACT: sac@genome.stanford.edu GENBANK UPDATE: 22 July 1997 90 unique yeast ORFs ORF HOMOLOG/SOURCE HOMOLOG DESCRIPTION P-VAL SCORE HSPs IDEN SIM ALN_ORF ALN_HIT LEN_ORF LEN_HIT LEN_ALN -------------- -------------- ---------------------- -------- ----- ------ ------ ------ ------ ------ ------ ------- ------- SSA4/YER103W 414975 BOVINE 70 KDA HEAT SHOCK PROTEIN- 0 2274 1 0.72 0.84 0.94 0.95 642 641 606 SSA3/YBL075C 428 BOVINE 79KDA HEAT SHOCK COGNATE P 3.3e-302 2224 2 0.70 0.83 0.95 0.95 649 650 619 SSA2/YLL024C 123651 MOUSE HEAT SHOCK COGNATE 71 KD P 4.9e-300 1373 3 0.72 0.83 0.98 0.97 639 646 624 SSA1/YAL005C 414975 BOVINE 70 KDA HEAT SHOCK PROTEIN- 3.4e-299 1353 3 0.70 0.83 0.97 0.97 642 641 624 VMA2/YBR127C 162699 BOVINE H+-ATPASE B SUBUNIT 5.8e-271 2002 1 0.95 0.95 0.80 1.00 517 415 415 SUG1/YGL048C 1195528 HUMAN 26S PROTEASE SUBUNIT S8=SU 1e-264 1950 1 0.97 0.97 1.00 1.00 405 405 405 TEF2/YBR118W 31092 HUMAN ELONGATION FACTOR 1-ALPHA 9.4e-261 1183 2 0.82 0.90 0.96 0.95 458 462 441 TEF1/YPR080W 31092 HUMAN ELONGATION FACTOR 1-ALPHA 9.4e-261 1183 2 0.82 0.90 0.96 0.95 458 462 441 ATP2/YJR121W 114562 RAT ATP SYNTHASE BETA CHAIN, M 1.2e-249 1082 3 0.76 0.86 0.96 0.93 511 529 491 UBI4/YLL039C 1083758 RAT POLYUBIQUITIN - RAT 5.4e-246 1835 1 0.96 0.98 6.86 3.23 381 810 2613 ACT1/YFL039C 28339 HUMAN GAMMA-ACTIN 5.5e-244 1795 1 0.89 0.96 1.00 1.00 375 375 375 ATP1/YBL099W 102 BOVINE H(+)-TRANSPORTING ATP SYNT 6.4e-243 1801 1 0.70 0.83 0.93 0.92 545 553 507 GCD11/YER025W 306900 HUMAN TRANSLATION INITIATION FAC 4.8e-236 1470 2 0.74 0.86 0.85 0.95 527 472 447 TUB1/YML085C 202210 MOUSE ALPHA-TUBULIN ISOTYPE M-AL 1e-235 1574 3 0.72 0.83 1.00 0.99 447 451 446 TUB2/YFL037W 91858 MOUSE TUBULIN BETA-4 CHAIN - MOU 5.1e-233 1722 1 0.73 0.86 0.94 0.97 457 444 429 YDR190C 2225877 RAT TIP49 3.4e-217 1623 1 0.71 0.85 0.94 0.95 463 456 434 YTA3/YKL145W 228886 HUMAN TAT-MEDIATED TRANSACTIVATI 1.5e-214 1362 2 0.75 0.86 0.86 0.93 467 433 402 SAH1/YER043C 904132 MOUSE COPPER BINDING PROTEIN 3.8e-212 942 3 0.71 0.82 0.94 0.97 449 432 420 YTA5/YDL007W 345717 HUMAN PROBABLE ATP-DEPENDENT PRO 2.4e-209 1520 2 0.72 0.85 0.96 0.95 437 440 420 SUP45/YBR143C 1491704 HUMAN C11 PROTEIN 5.4e-207 1301 2 0.71 0.85 0.93 0.93 437 437 405 GLC7/YER133W 402778 HUMAN SERINE /THREONINE SPECIFIC 2.6e-198 1440 1 0.86 0.93 0.97 0.93 312 323 302 YTA1/YOR117W 1395184 RAT PROTEASOMAL ATPASE (RAT TB 4.7e-191 1331 2 0.70 0.85 0.91 0.90 434 439 395 PPH22/YDL188C 190226 HUMAN PROTEIN PHOSPHATASE-2A CAT 6.9e-178 1307 1 0.76 0.88 0.80 0.97 377 309 301 YDL084W 205942 RAT LIVER NUCLEAR PROTEIN P47 3.5e-177 829 2 0.70 0.84 0.82 0.91 446 399 364 PPH21/YDL134C 190226 HUMAN PROTEIN PHOSPHATASE-2A CAT 6.6e-177 1302 1 0.75 0.88 0.82 0.97 369 309 301 YTA2/YDR394W 263099 HUMAN TAT BINDING PROTEIN 7, TBP 2.5e-159 1047 2 0.70 0.81 0.78 0.73 428 458 335 RPS7B/YJR145C 337510 HUMAN RIBOSOMAL PROTEIN S4X ISOF 9.2e-131 967 1 0.70 0.81 0.98 0.98 261 263 257 SDH2/YLL041C 180917 HUMAN SUCCINATE-UBIQUINONE OXIDO 1.4e-130 514 2 0.73 0.86 0.88 0.90 266 262 235 RPS7A/YHR203C 337510 HUMAN RIBOSOMAL PROTEIN S4X ISOF 1.3e-129 958 1 0.70 0.81 0.98 0.98 261 263 257 GSP2/YOR185C 190879 HUMAN RAS-LIKE PROTEIN 2e-120 898 1 0.85 0.92 0.88 0.90 220 216 194 NOP1/YDL014W 31395 HUMAN FIBRILLARIN 5e-120 734 2 0.74 0.88 0.69 0.70 327 321 225 GSP1/YLR293C 190879 HUMAN RAS-LIKE PROTEIN 1.7e-116 868 1 0.90 0.95 0.80 0.81 219 216 176 BMH2/YDR099W 984319 HUMAN EPSILON 14-3-3 PROTEIN 3.2e-112 650 2 0.79 0.87 0.80 0.86 273 255 219 BMH1/YER177W 984319 HUMAN EPSILON 14-3-3 PROTEIN 5.6e-111 636 2 0.80 0.86 0.81 0.85 267 255 217 CDC42/YLR229C 183490 HUMAN GTP-BINDING PROTEIN G25K 1.1e-110 823 1 0.80 0.89 1.00 1.00 191 191 191 SPT15/YER148W 227072 HUMAN TATA BINDING FACTOR TFIID 2.5e-101 762 1 0.80 0.91 0.76 0.54 240 335 182 YCL059C 1326184 HUMAN REV INTERACTING PROTEIN RI 3e-101 734 2 0.72 0.84 0.66 0.72 316 288 207 YPT1/YFL038C 131786 HUMAN RAS-RELATED PROTEIN RAB-1A 1.1e-100 726 2 0.75 0.87 0.94 0.94 206 205 193 ARF2/YDL137W 178983 HUMAN ADP-RIBOSYLATION FACTOR (A 3.2e-96 726 1 0.80 0.93 0.91 0.91 181 181 165 ARF1/YDL192W 178983 HUMAN ADP-RIBOSYLATION FACTOR (A 1.3e-95 721 1 0.80 0.93 0.91 0.91 181 181 164 RHO1/YPR165W 36030 HUMAN ORF (AA 1-193) 5.2e-93 700 1 0.75 0.86 0.85 0.92 209 193 177 TDH1/YJL052W 1931635 SHEEP GLYCERALDEHYDE-3-PHOSPHATE 1.4e-91 698 1 0.76 0.85 0.55 0.98 332 184 181 TDH3/YGR192C 1931635 SHEEP GLYCERALDEHYDE-3-PHOSPHATE 6.1e-91 696 1 0.76 0.84 0.55 0.98 332 184 181 TDH2/YJR009C 1931635 SHEEP GLYCERALDEHYDE-3-PHOSPHATE 3.7e-90 689 1 0.75 0.84 0.55 0.98 332 184 181 SUP46/YBR189W 57143 RAT RIBOSOMAL PROTEIN S9 9.7e-90 673 1 0.75 0.89 0.86 0.86 195 194 167 YPL081W 57143 RAT RIBOSOMAL PROTEIN S9 3.4e-89 670 1 0.75 0.89 0.85 0.86 197 194 167 UBC4/YBR082C 1145689 HUMAN UBCH5B 1.9e-86 659 1 0.81 0.90 0.97 0.98 148 147 144 UBC5/YDR059C 1145689 HUMAN UBCH5B 6.9e-86 658 1 0.81 0.92 0.97 0.98 148 147 144 YPR102C 132649 RAT 60S RIBOSOMAL PROTEIN L11 1.2e-84 644 1 0.72 0.85 0.96 0.94 174 178 167 RPL16A/YGR085C 132649 RAT 60S RIBOSOMAL PROTEIN L11 1.3e-84 644 1 0.72 0.85 0.96 0.94 174 178 167 YPT31/YER031C 35889 HUMAN RAS-LIKE PROTEIN (AA 1-216 3.5e-83 645 1 0.71 0.87 0.77 0.79 223 216 171 YPT32/YGL210W 433064 MOUSE RAB11B 2.7e-82 634 1 0.70 0.87 0.77 0.78 222 218 171 RPS13C/YDR064W 488417 HUMAN RIBOSOMAL PROTEIN S13 5.7e-82 623 1 0.78 0.89 0.99 0.99 151 151 150 HHT1/YBR010W 306848 HUMAN H3.3 HISTONE 1e-80 616 1 0.90 0.96 1.00 1.00 136 136 136 HHT2/YNL031C 306848 HUMAN H3.3 HISTONE 1e-80 616 1 0.90 0.96 1.00 1.00 136 136 136 UBI2/YKR094C 1070592 HUMAN UBIQUITIN / RIBOSOMAL PROT 1.1e-79 609 1 0.90 0.95 1.00 1.00 128 128 128 UBI1/YIL148W 1070592 HUMAN UBIQUITIN / RIBOSOMAL PROT 1.1e-79 609 1 0.90 0.95 1.00 1.00 128 128 128 RPS28A/YGR118W 730647 HUMAN 40S RIBOSOMAL PROTEIN S23 9.5e-77 590 1 0.78 0.90 0.98 0.99 145 143 142 RPS28B/YPR132W 730647 HUMAN 40S RIBOSOMAL PROTEIN S23 9.5e-77 590 1 0.78 0.90 0.98 0.99 145 143 142 RAD6/YGL058W 106346 HUMAN HYPOTHETICAL PROTEIN - HUM 6.2e-76 503 2 0.70 0.86 0.89 1.01 172 151 153 UBC13/YDR092W 1181558 HUMAN UBIQUITIN-CONJUGATING ENZY 2.2e-74 575 1 0.70 0.84 0.97 0.97 153 152 148 RPL17B/YER117W 36126 HUMAN RIBOSOMAL PROTEIN L17 4.7e-74 568 1 0.80 0.91 0.96 0.94 137 140 132 RPL17A/YBL087C 36126 HUMAN RIBOSOMAL PROTEIN L17 4.7e-74 568 1 0.80 0.91 0.96 0.94 137 140 132 YML026C 133840 HUMAN 40S RIBOSOMAL PROTEIN S18 5.7e-71 539 1 0.72 0.87 0.92 0.88 146 152 134 YDR450W 133840 HUMAN 40S RIBOSOMAL PROTEIN S18 5.7e-71 539 1 0.72 0.87 0.92 0.88 146 152 134 RPS24A/YJL190C 1173220 HUMAN 40S RIBOSOMAL PROTEIN S15A 1.8e-70 535 1 0.77 0.88 1.00 1.00 130 130 130 RPS24B/YLR367W 1173220 HUMAN 40S RIBOSOMAL PROTEIN S15A 3.7e-70 533 1 0.76 0.88 1.00 1.00 130 130 130 RPS18A/YDR025W 133723 HUMAN 40S RIBOSOMAL PROTEIN S11 2.1e-69 351 3 0.74 0.87 0.88 0.87 156 158 137 RPS18B/YBR048W 133723 HUMAN 40S RIBOSOMAL PROTEIN S11 2.1e-69 351 3 0.74 0.87 0.88 0.87 156 158 137 RPL41A/YNL162W 1684917 HUMAN L44-LIKE RIBOSOMAL PROTEIN 3.7e-57 276 3 0.71 0.86 0.98 1.08 116 106 114 MAK18/YHR141C 1684917 HUMAN L44-LIKE RIBOSOMAL PROTEIN 1e-56 276 3 0.72 0.86 1.08 1.08 106 106 114 YOR226C 1685102 HUMAN NIFU-LIKE PROTEIN 3.4e-55 287 2 0.70 0.86 0.78 1.00 156 121 121 YPL135W 1685102 HUMAN NIFU-LIKE PROTEIN 2.6e-53 281 2 0.71 0.83 0.72 0.98 165 121 119 HTB1/YDR224C 1749806 HUMAN HISTONE H2B 6.6e-52 419 1 0.80 0.94 0.76 0.79 131 126 100 RPS26B/YER131W 296452 HUMAN RIBOSOMAL PROTEIN S26 7.9e-50 391 1 0.71 0.83 0.86 0.89 119 115 102 RPS26A/YGL189C 296452 HUMAN RIBOSOMAL PROTEIN S26 9.5e-50 391 1 0.71 0.83 0.86 0.89 119 115 102 HTA1/YDR225W 121992 HUMAN HISTONE H2A.X 6.2e-49 361 2 0.71 0.79 0.85 0.78 132 143 112 HHF2/YNL030W 32008 HUMAN HISTONE 1.2e-48 378 1 0.90 0.96 0.80 0.80 103 103 82 HHF1/YBR009C 32008 HUMAN HISTONE 1.2e-48 378 1 0.90 0.96 0.80 0.80 103 103 82 YML024W 133825 HUMAN 40S RIBOSOMAL PROTEIN S17 3.5e-47 373 1 0.77 0.89 0.68 0.68 136 135 92 RP51B/YDR447C 133825 HUMAN 40S RIBOSOMAL PROTEIN S17 4.2e-47 373 1 0.77 0.89 0.68 0.68 136 135 92 HTA2/YBL003C 31980 HUMAN HISTONE H2A.1 9.9e-47 369 1 0.71 0.77 0.79 0.80 132 130 104 HTZ1/YOL012C 184060 HUMAN HISTONE (H2A.Z) 1.6e-45 359 1 0.76 0.87 0.70 0.73 134 128 94 UBI3/YLR167W 1070592 HUMAN UBIQUITIN / RIBOSOMAL PROT 1.3e-43 329 2 0.88 0.96 0.51 0.61 152 128 78 RPS27B/YHR021C 431319 HUMAN METALLOPANSTIMULIN 6.3e-40 318 1 0.72 0.78 1.00 0.98 82 84 82 RPS27A/YKL156W 431319 HUMAN METALLOPANSTIMULIN 7.8e-40 317 1 0.71 0.78 1.00 0.98 82 84 82 HTB2/YBL002W 1749806 HUMAN HISTONE H2B 8.7e-40 416 1 0.80 0.93 0.76 0.79 131 126 100 RPB10/YOR210W 1588297 HUMAN RNA POLYMERASE:SUBUNIT=7.6 3.6e-34 158 2 0.71 0.82 1.03 1.07 70 67 72 RPS33A/YOR167C 337403 HUMAN RIBOSOMAL PROTEIN S28 2.1e-29 244 1 0.76 0.90 0.93 0.90 67 69 62 RPS33B/YLR264W 337403 HUMAN RIBOSOMAL PROTEIN S28 2.2e-29 244 1 0.76 0.90 0.93 0.90 67 69 62