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ID   BPV1       standard; DNA; VRL; 7945 BP.
XX
AC   X02346; J02044; M24622; X00473;
XX
DT   01-JUL-1995 (Rel. 11, Created)
DT   01-JUL-1995 (Rel. 12, Last updated, Version 1)
XX
DE   Bovine papillomavirus type 1 (BPV-1) genome - complete.
XX
KW   cloning vector.
XX
OS   Bovine papillomavirus
OC   Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
OC   Papillomavirus.
XX
RN   [1]
RP   1-7945
RX   MEDLINE; 83012974.
RA   Chen E.Y., Howley P.M., Levinson A.D., Seeburg P.H.;
RT   "The primary structure and genetic organization of the bovine
RT   papillomavirus type 1 genome";
RL   Nature 299:529-534(1982).
XX
RN   [2]
RP   7120-7399
RX   MEDLINE; 87246504.
RA   Baker C.C., Howley P.M.;
RT   "Differential promoter utilization by the bovine papillomavirus in
RT   transformed cells and productively infected wart tissues";
RL   EMBO J. 6:1027-1035(1987).
XX
CC   NM (BPV-1)
CC   CM (yes)
CC   NA (ds-DNA)
CC   TP (linear)
CC   ST ()
CC   TY (virus)
CC   SP ()
CC   HO (cow)
CC   CP ()
CC   FN (cloning)
CC   SE ()
CC   PA (cow)
CC   BR ()
CC   OF ()
CC   OR ()
XX
FH   Key             Location/Qualifiers
FH
FT   misc_feature    0..0
FT                   /note="1. cow
FT                   -> BPV-1 7945bp [bovine papillomavirus type 1]"
FT   repeat_unit     37..47
FT                   /note="inverted repeat A"
FT   promoter        58..63
FT                   /note="TATA sequence"
FT   misc_feature    89..91
FT                   /note="pot. cap site"
FT   misc_feature    182..183
FT                   /note="pot. splice site"
FT   promoter        4072..4077
FT                   /note="TATA sequence"
FT   misc_feature    4150..4150
FT                   /note="pot. open reading frame start site"
FT   CDS             4171..7092
FT                   /note="put. open reading frame"
FT   misc_feature    4179..4183
FT                   /note="polyadenylation signal"
FT   promoter        5089..5094
FT                   /note="TATA sequence"
FT   promoter        6859..6864
FT                   /note="TATA sequence"
FT   repeat_unit     7068..7081
FT                   /note="inverted repeat B"
FT   polyA_site      7083..7083
FT                   /note="pot. polyadenylation site"
FT   repeat_unit     7089..7098
FT                   /note="inverted repeat C"
FT   repeat_unit     7098..7108
FT                   /note="inverted repeat D"
FT   promoter        7108..7113
FT                   /note="TATA sequence"
FT   misc_RNA        7131..7133
FT                   /note="pot. cap site"
FT   misc_feature    7137..7138
FT                   /note="pot. splice site"
FT   repeat_unit     7139..7152
FT                   /note="inverted repeat E"
FT   repeat_unit     7241..7253
FT                   /note="inverted repeat E'"
FT   repeat_unit     7331..7341
FT                   /note="inverted repeat D'"
FT   repeat_unit     7435..7444
FT                   /note="inverted repeat C'"
FT   repeat_unit     7568..7581
FT                   /note="inverted repeat B"
FT   repeat_unit     7596..7606
FT                   /note="inverted repeat F"
FT   repeat_unit     7872..7882
FT                   /note="inverted repeat F'"
FT   repeat_unit     7921..7931
FT                   /note="inverted repeat A'"
XX
SQ   Sequence 7945 BP; 2270 A; 1713 C; 1887 G; 2074 T; 1 other;
     gttaacaata atcacaccat caccgttttt tcaagcggga aaaaatagcc agctaactat
     aaaaagctgc tgacagaccc cggttttcac atggacctga aaccttttgc aagaaccaat
     ccattctcag ggttggattg tctgtggtgc agagagcctc ttacagaagt tgatgctttt
     aggtgcatgg tcaaagactt tcatgttgta attcgggaag gctgtagata tggtgcatgt
     accatttgtc ttgaaaactg tttagctact gaaagaagac tttggcaagg tgttccagta
     acaggtgagg aagctgaatt attgcatggc aaaacacttg ataggctttg cataagatgc
     tgctactgtg ggggcaaact aacaaaaaat gaaaaacatc ggcatgtgct ttttaatgag
     cctttctgca aaaccagagc taacataatt agaggacgct gctacgactg ctgcagacat
     ggttcaaggt ccaaataccc atagaaactt ggatgattca cctgcaggac cgttgctgat
     tttaagtcca tgtgcaggca cacctaccag gtctcctgca gcacctgatg cacctgattt
     cagacttccg tgccatttcg gccgtcctac taggaagcga ggtcccacta cccctccgct
     ttcctctccc ggaaaactgt gtgcaacagg gccacgtcga gtgtattctg tgactgtctg
     ctgtggaaac tgcggaaaag agctgacttt tgctgtgaag accagctcga cgtccctgct
     tggatttgaa caccttttaa actcagattt agacctcttg tgtccacgtt gtgaatctcg
     cgagcgtcat ggcaaacgat aaaggtagca attgggattc gggcttggga tgctcatatc
     tgctgactga ggcagaatgt gaaagtgaca aagagaatga ggaacccggg gcaggtgtag
     aactgtctgt ggaatctgat cggtatgata gccaggatga ggattttgtt gacaatgcat
     cagtctttca gggaaatcac ctggaggtct tccaggcatt agagaaaaag gcgggtgagg
     agcagatttt aaatttgaaa agaaaagtat tggggagttc gcaaaacagc agcggttccg
     aagcatctga aactccagtt aaaagacgga aatcaggagc aaagcgaaga ttatttgctg
     aaaangaagc taaccgtgtt cttacgcccc tccaggtaca gggggagggg gaggggaggc
     aagaacttaa tgaggagcag gcaattagtc atctacatct gcagcttgtt aaatctaaaa
     atgctacagt ttttaagctg gggctcttta aatctttgtt cctttgtagc ttccatgata
     ttacgaggtt gtttaagaat gataagacca ctaatcagca atgggtgctg gctgtgtttg
     gccttgcaga ggtgtttttt gaggcgagtt tcgaactcct aaagaagcag tgtagttttc
     tgcagatgca aaaaagatct catgaaggag gaacttgtgc agtttactta atctgcttta
     acacagctaa aagcagagaa acagtccgga atctgatggc aaacacgcta aatgtaagag
     aagagtgttt gatgctgcag ccagctaaaa ttcgaggact cagcgcagct ctattctggt
     ttaaaagtag tttgtcaccc gctacactta aacatggtgc tttacctgag tggatacggg
     cgcaaactac tctgaacgag agcttgcaga ccgagaaatt cgacttcgga actatggtgc
     aatgggccta tgatcacaaa tatgctgagg agtctaaaat agcctatgaa tatgctttgg
     ctgcaggatc tgatagcaat gcacgggctt ttttagcaac taacagccaa gctaagcatg
     tgaaggactg tgcaactatg gtaagacact atctaagagc tgaaacacaa gcattaagca
     tgcctgcata tattaaagct aggtgcaagc tggcaactgg ggaaggaagc tggaagtcta
     tcctaacttt ttttaactat cagaatattg aattaattac ctttattaat gctttaaagc
     tctggctaaa aggaattcca aaaaaaaact gtttagcatt tattggccct ccaaacacag
     gcaagtctat gctctgcaac tcattaattc attttttggg tggtagtgtt ttatcttttg
     ccaaccataa aagtcacttt tggcttgctt ccctagcaga tactagagct gctttagtag
     atgatgctac tcatgcttgc tggaggtact ttgacacata cctcagaaat gcattggatg
     gctaccctgt cagtattgat agaaaacaca aagcagcggt tcaaattaaa gctccacccc
     tcctggtaac cagtaatatt gatgtgcagg cagaggacag atatttgtac ttgcatagtc
     gggtgcaaac ctttcgcttt gagcagccat gcacagatga atcgggtgag caacctttta
     atattactga tgcagattgg aaatcttttt ttgtaaggtt atgggggcgt ttagacctga
     ttgacgagga ggaggatagt gaagaggatg gagacagcat gcgaacgttt acatgtagcg
     caagaaacac aaatgcagtt gattgagaaa agtagtgata agttgcaaga tcatatactg
     tactggactg ctgttagaac tgagaacaca ctgctttatg ctgcaaggaa aaaaggggtg
     actgtcctag gacactgcag agtaccacac tctgtagttt gtcaagagag agccaagcag
     gccattgaaa tgcagttgtc tttgcaggag ttaagcaaaa ctgagtttgg ggatgaacca
     tggtctttgc ttgacacaag ctgggaccga tatatgtcag aacctaaacg gtgctttaag
     aaaggcgcca gggtggtaga ggtggagttt gatggaaatg caagcaatac aaactggtac
     actgtctaca gcaatttgta catgcgcaca gaggacggct ggcagcttgc gaaggctggg
     gctgacggaa ctgggctcta ctactgcacc atggccggtg ctggacgcat ttactattct
     cgctttggtg acgaggcagc cagatttagt acaacagggc attactctgt aagagatcag
     gacagagtgt atgctggtgt ctcatccacc tcttctgatt ttagagatcg cccagacgga
     gtctgggtcg catccgaagg acctgaagga gaccctgcag gaaaagaagc cgagccagcc
     cagcctgtct cttctttgct cggctccccc gcctgcggtc ccatcagagc aggcctcggt
     tgggtacggg acggtcctcg ctcgcacccc tacaattttc ctgcaggctc ggggggctct
     attctccgct cttcctccac cccgtgcagg gcacggtacc ggtggacttg gcatcaaggc
     aggaagaaga ggagcagtcg cccgactcca cagaggaaga accagtgact ctcccaaggc
     gcaccaccaa tgatggattc cacctgttaa aggcaggagg gtcatgcttt gctctaattt
     caggaactgc taaccaggta aagtgctatc gctttcgggt gaaaaagaac catagacatc
     gctacgagaa ctgcaccacc acctggttca cagttgctga caacggtgct gaaagacaag
     gacaagcaca aatactgatc acctttggat cgccaagtca aaggcaagac tttctgaaac
     atgtaccact acctcctgga atgaacattt ccggctttac agccagcttg gacttctgat
     cactgccatt gccttttctt catctgactg gtgtactatg ccaaatctat ggtttctatt
     gttcttggga ctagttgctg caatgcaact gctgctatta ctgttcttac tcttgttttt
     tcttgtatac tgggatcatt ttgagtgctc ctgtacaggt ctgccctttt aatgccttta
     catcactggc tattggctgt gtttttactg ttgtgtggat ttgatttgtt ttatatactg
     tatgaagttt tttcatttgt gcttgtattg ctgtttgtaa gttttttact agagtttgta
     ttccccctgc tcagatttta tatggtttaa gctgcagcaa taaaaatgag tgcacgaaaa
     agagtaaaac gtgccagtgc ctatgacctg tacaggacat gcaagcaagc gggcacatgt
     ccaccagatg tgataccaaa ggtagaagga gatactatag cagataaaat tttgaaattt
     gggggtcttg caatctactt aggagggcta ggaataggaa catggtctac tggaagggtt
     gctgcaggtg gatcaccaag gtacacacca ctccgaacag cagggtccac atcatcgctt
     gcatcaatag gatccagagc tgtaacagca gggacccgcc ccagtatagg tgcgggcatt
     cctttagaca cccttgaaac tcttggggcc ttgcgtccag gggtgtatga ggacactgtg
     ctaccagagg cccctgcaat agtcactcct gatgctgttc ctgcagattc agggcttgat
     gccctgtcca taggtacaga ctcgtccacg gagaccctca ttactctgct agagcctgag
     ggtcccgagg acatagcggt tcttgagctg caacccctgg accgtccaac ttggcaagta
     agcaatgctg ttcatcagtc ctctgcatac cacgcccctc tgcagctgca atcgtccatt
     gcagaaacat ctggtttaga aaatattttt gtaggaggct cgggtttagg ggatacagga
     ggagaaaaca ttgaactgac atacttcggg tccccacgaa caagcacgcc ccgcagtatt
     gcctctaaat cacgtggcat tttaaactgg ttcagtaaac ggtactacac acaggtgccc
     acggaagatc ctgaagtgtt ttcatcccaa acatttgcaa acccactgta tgaagcagaa
     ccagctgtgc ttaagggacc tagtggacgt gttggactca gtcaggttta taaacctgat
     acacttacaa cacgtagcgg gacagaggtg ggaccacagc tacatgtcag gtactcattg
     agtactatac atgaagatgt agaagcaatc ccctacacag ttgatgaaaa tacacaggga
     cttgcattcg tacccttgca tgaagagcaa gcaggttttg aggagataga attagatgat
     tttagtgaga cacatagact gctacctcag aacacctctt ctacacctgt tggtagtggt
     gtacgaagaa gcctcattcc aactcaggaa tttagtgcaa cacggcctac aggtgttgta
     acctatggct cacctgacac ttactctgct agcccagtta ctgaccctga ttctacctct
     cctagtctag ttatcgatga cactactact acaccaatca ttataattga tgggcacaca
     gttgatttgt acagcagtaa ctacaccttg catccctcct tgttgaggaa acgaaaaaaa
     cggaaacatg cctaattttt tttgcagatg gcgttgtggc aacaaggcca gaagctgtat
     ctccctccaa cccctgtaag caaggtgctt tgcagtgaaa cctatgtgca aagaaaaagc
     attttttatc atgcagaaac ggagcgcctg ctaactatag gacatccata ttacccagtg
     tctatcgggg ccaaaactgt tcctaaggtc tctgcaaatc agtatagggt atttaaaata
     caactacctg atcccaatca atttgcacta cctgacagga ctgttcacaa cccaagtaaa
     gagcggctgg tgtgggcagt cataggtgtg caggtgtcca gagggcagcc tcttggaggt
     actgtaactg ggcaccccac ttttaatgct ttgcttgatg cagaaaatgt gaatagaaaa
     gtcaccaccc aaacaacaga tgacaggaaa caaacaggcc tagatgctaa gcaacaacag
     attctgttgc taggctgtac ccctgctgaa ggggaatatt ggacaacagc ccgtccatgt
     gttactgatc gtctagaaaa tggcgcctgc cctcctcttg aattaaaaaa caagcacata
     gaagatgggg atatgatgga aattgggttt ggtgcagcca acttcaaaga aattaatgca
     agtaaatcag atctacctct tgacattcaa aatgagatct gcttgtaccc agactacctc
     aaaatggctg aggacgctgc tggtaatagc atgttctttt ttgcaaggaa agaacaggtg
     tatgttagac acatctggac cagagggggc tcggagaaag aagcccctac cacagatttt
     tatttaaaga ataataaagg ggatgccacc cttaaaatac ccagtgtgca ttttggtagt
     cccagtggct cactagtctc aactgataat caaattttta atcggcccta ctggctattc
     cgtgcccagg gcatgaacaa tggaattgca tggaataatt tattgttttt aacagtgggg
     gacaatacac gtggtactaa tcttaccata agtgtagcct cagatggaac cccactaaca
     gagtatgata gctcaaaatt caatgtatac catagacata tggaagaata taagctagcc
     tttatattag agctatgctc tgtggaaatc acagctcaaa ctgtgtcaca tctgcaagga
     cttatgccct ctgtgcttga aaattgggaa ataggtgtgc agcctcctac ctcatcgata
     ttagaggaca cctatcgcta tatagagtct cctgcaacta aatgtgcaag caatgtaatt
     cctgcaaaag aagaccctta tgcagggttt aagttttgga acatagatct taaagaaaag
     ctttctttgg acttagatca atttcccttg ggaagaagat ttttagcaca gcaaggggca
     ggatgttcaa ctgtgagaaa acgaagaatt agccaaaaaa cttccagtaa gcctgcaaaa
     aaaaaaaaaa aataaaagct aagtttctat aaatgttctg taaatgtaaa acagaaggta
     agtcaactgc acctaataaa aatcacttaa tagcaatgtg ctgtgtcagt tgtttattgg
     aaccacaccc ggtacacatc ctgtccagca tttgcagtgc gtgcattgaa ttattgtgct
     ggctagactt catggcgcct ggcaccgaat cctgccttct cagcgaaaat gaataattgc
     tttgttggca agaaactaag catcaatggg acgcgtgcaa agcaccggcg gcggtagatg
     cggggtaagt actgaatttt aattcgacct atcccggtaa agcgaaagcg acacgctttt
     ttttcacaca tagcgggacc gaacacgtta taagtatcga ttaggtctat ttttgtctct
     ctgtcggaac cagaactggt aaaagtttcc attgcgtctg ggcttgtcta tcattgcgtc
     tctatggttt ttggaggatt agacggggcc accagtaatg gtgcatagcg gatgtctgta
     ccgccatcgg tgcaccgata taggtttggg gctccccaag ggactgctgg gatgacagct
     tcatattata ttgaatgggc gcataatcag cttaattggt gaggacaagc tacaagttgt
     aacctgatct ccacaaagta cgttgccggt cggggtcaaa ccgtcttcgg tgctcgaaac
     cgccttaaac tacagacagg tcccagccaa gtaggcggat caaaacctca aaaaggcggg
     agccaatcaa aatgcagcat tatattttaa gctcaccgaa accggtaagt aaagactatg
     tattttttcc cagtgaataa ttgtt
//