SGD Help: Worm-Yeast BLAST Lists By Percent Identity
Contents
This page lists the BLAST reports for all worm ORFs that hit at least one yeast protein with at least the percent of amino acid identity (indicated in the table on the previous page) over 50% or more of the worm sequence for a given comparison.
- ORF: lists the worm ORFs in order of ascending P-value. By clicking on the worm ORF name, you can go to the Sanger Centre Sequence page for that particular worm ORF.
- HOMOLOG: lists the sequence name of the corresponding yeast homolog. By clicking on the yeast sequence name, you can go to the SGD Locus page for that particular ORF.
- EXPECT: lists the P-value for each hit in ascending (most related to least related) order.
- FR_ID: lists the fraction of identical amino acids for each hit.
- FR_SIM: lists the fraction of similar amino acids for each hit.
- FR_ALQ: lists the fraction of the worm sequence that is aligned.
- HOMOLOG DESCRIPTION: lists the description of the yeast ORF.
Last update 1998-12-08 KD
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