Index

Computational Methodology

  1. Clustering of BLAST results.

  2. Analysis of clusters.

    ClustalW Multiple alignment of clustered protein sequences.
    ClustalW Neighbor-joining tree based on alignment.
    Phylip Draw rooted and unrooted trees
    GD Draw colorized and image-mapped rooted trees

  3. Visualization of results.

  4. Functional classification


Comparing the S. cerevisiae and C. elegans Proteomes
Stephen A. Chervitz
22 Feb 1999
sac@neomorphic.com